Construct: shRNA TRCN0000338803
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_020195.2-997s21c1
- DNA Barcode:
- GCTGAAGCCATCTGGTTCTTA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- SDR39U1 (56948)
- Gene Description:
- short chain dehydrogenase/reductase family 39U member 1
- Transcript:
- RefSeq NM_020195.2 (CURRENT)
- Match location:
- Position 997 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000338803)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCTGAAGCCATCTGGTTCTTA
- Hairpin Sequence:
-
5'-CCGG-GCTGAAGCCATCTGGTTCTTA-CTCGAG-TAAGAACCAGATGGCTTCAGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCTGAAGCCATCTGGTTCTTACTCGAGTAAGAACCAGATGGCTTCAGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCTGAAGCCATCTGGTTCTTACTCGAGTAAGAACCAGATGGCTTCAGC-3'
Other clones with same target sequence:
-
TRCN0000155046
