Construct: shRNA TRCN0000338854

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_005156.5-860s21c1
DNA Barcode:
CAGTATGCTGACCCAGTAAAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PTBP3 (9991)
Gene Description:
polypyrimidine tract binding protein 3
Transcript:
RefSeq NM_005156.5 (NON-CURRENT)
Match location:
Position 860 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000338854)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAGTATGCTGACCCAGTAAAT
Hairpin Sequence:
5'-CCGG-CAGTATGCTGACCCAGTAAAT-CTCGAG-ATTTACTGGGTCAGCATACTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAGTATGCTGACCCAGTAAATCTCGAGATTTACTGGGTCAGCATACTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAGTATGCTGACCCAGTAAATCTCGAGATTTACTGGGTCAGCATACTG-3'

Other clones with same target sequence:

(none)