Construct: shRNA TRCN0000340121
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_145448.4-2844s21c1
- DNA Barcode:
- GCCTACTAAATGTTGTTTCAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- 9030617O03Rik (217830)
- Gene Description:
- RIKEN cDNA 9030617O03 gene
- Transcript:
- RefSeq NM_145448.4 (CURRENT)
- Match location:
- Position 2844 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000340121)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCCTACTAAATGTTGTTTCAT
- Hairpin Sequence:
-
5'-CCGG-GCCTACTAAATGTTGTTTCAT-CTCGAG-ATGAAACAACATTTAGTAGGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCCTACTAAATGTTGTTTCATCTCGAGATGAAACAACATTTAGTAGGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCCTACTAAATGTTGTTTCATCTCGAGATGAAACAACATTTAGTAGGC-3'
Other clones with same target sequence:
-
TRCN0000121357
