Construct: shRNA TRCN0000346903
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_175258.3-7492s21c1
- DNA Barcode:
- CCAGATTTCATTTCCTCTAAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Rapgef6 (192786)
- Gene Description:
- Rap guanine nucleotide exchange factor (GEF) 6
- Transcript:
- RefSeq NM_175258.3 (NON-CURRENT)
- Match location:
- Position 7492 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000346903)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCAGATTTCATTTCCTCTAAT
- Hairpin Sequence:
-
5'-CCGG-CCAGATTTCATTTCCTCTAAT-CTCGAG-ATTAGAGGAAATGAAATCTGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCAGATTTCATTTCCTCTAATCTCGAGATTAGAGGAAATGAAATCTGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCAGATTTCATTTCCTCTAATCTCGAGATTAGAGGAAATGAAATCTGG-3'
Other clones with same target sequence:
-
TRCN0000176791
