Construct: shRNA TRCN0000347442

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001017966.2-1351s21c1
DNA Barcode:
GAGGAAATTGCAGACCAAGAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Ddi2 (68817)
Gene Description:
DNA-damage inducible protein 2
Transcript:
RefSeq NM_001017966.2 (CURRENT)
Match location:
Position 1351 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000347442)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAGGAAATTGCAGACCAAGAA
Hairpin Sequence:
5'-CCGG-GAGGAAATTGCAGACCAAGAA-CTCGAG-TTCTTGGTCTGCAATTTCCTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAGGAAATTGCAGACCAAGAACTCGAGTTCTTGGTCTGCAATTTCCTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAGGAAATTGCAGACCAAGAACTCGAGTTCTTGGTCTGCAATTTCCTC-3'

Other clones with same target sequence:

  1. TRCN0000198564