Construct: shRNA TRCN0000348525

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_145070.3-656s21c1
DNA Barcode:
AGCTTACCGTGGAGATGTTTG

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Hip1r (29816)
Gene Description:
huntingtin interacting protein 1 related
Transcript:
RefSeq NM_145070.3 (CURRENT)
Match location:
Position 656 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000348525)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGCTTACCGTGGAGATGTTTG
Hairpin Sequence:
5'-CCGG-AGCTTACCGTGGAGATGTTTG-CTCGAG-CAAACATCTCCACGGTAAGCT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGCTTACCGTGGAGATGTTTGCTCGAGCAAACATCTCCACGGTAAGCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGCTTACCGTGGAGATGTTTGCTCGAGCAAACATCTCCACGGTAAGCT-3'

Other clones with same target sequence:

(none)