Construct: shRNA TRCN0000348944

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_009986.3-4832s21c1
DNA Barcode:
AGGTTCTGGAATAACTCTTTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Cux1 (13047)
Gene Description:
cut-like homeobox 1
Transcript:
RefSeq NM_009986.3 (NON-CURRENT)
Match location:
Position 4832 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000348944)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGGTTCTGGAATAACTCTTTA
Hairpin Sequence:
5'-CCGG-AGGTTCTGGAATAACTCTTTA-CTCGAG-TAAAGAGTTATTCCAGAACCT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGGTTCTGGAATAACTCTTTACTCGAGTAAAGAGTTATTCCAGAACCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGGTTCTGGAATAACTCTTTACTCGAGTAAAGAGTTATTCCAGAACCT-3'

Other clones with same target sequence:

(none)