Construct: shRNA TRCN0000349952

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_023130.3-965s21c1
DNA Barcode:
CGATACCTGTCAAGCTCTTTG

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Raly (19383)
Gene Description:
hnRNP-associated with lethal yellow
Transcript:
RefSeq NM_023130.3 (CURRENT)
Match location:
Position 965 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000349952)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGATACCTGTCAAGCTCTTTG
Hairpin Sequence:
5'-CCGG-CGATACCTGTCAAGCTCTTTG-CTCGAG-CAAAGAGCTTGACAGGTATCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGATACCTGTCAAGCTCTTTGCTCGAGCAAAGAGCTTGACAGGTATCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGATACCTGTCAAGCTCTTTGCTCGAGCAAAGAGCTTGACAGGTATCG-3'

Other clones with same target sequence:

(none)