Construct: shRNA TRCN0000350342

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_017944.3-4803s21c1
DNA Barcode:
CGGAATCATGTTGTGCACTAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
USP47 (55031)
Gene Description:
ubiquitin specific peptidase 47
Transcript:
RefSeq NM_017944.3 (NON-CURRENT)
Match location:
Position 4803 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000350342)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGGAATCATGTTGTGCACTAT
Hairpin Sequence:
5'-CCGG-CGGAATCATGTTGTGCACTAT-CTCGAG-ATAGTGCACAACATGATTCCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGGAATCATGTTGTGCACTATCTCGAGATAGTGCACAACATGATTCCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGGAATCATGTTGTGCACTATCTCGAGATAGTGCACAACATGATTCCG-3'

Other clones with same target sequence:

  1. TRCN0000007692