Construct: shRNA TRCN0000352644

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_016653.2-377s21c1
DNA Barcode:
CCTCAGTCACAGAAACATCAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
MAP3K20 (51776)
Gene Description:
mitogen-activated protein kinase kinase kinase 20
Transcript:
RefSeq NM_016653.2 (NON-CURRENT)
Match location:
Position 377 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000352644)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCTCAGTCACAGAAACATCAT
Hairpin Sequence:
5'-CCGG-CCTCAGTCACAGAAACATCAT-CTCGAG-ATGATGTTTCTGTGACTGAGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCTCAGTCACAGAAACATCATCTCGAGATGATGTTTCTGTGACTGAGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCTCAGTCACAGAAACATCATCTCGAGATGATGTTTCTGTGACTGAGG-3'

Other clones with same target sequence:

  1. TRCN0000003266