Construct: shRNA TRCN0000360798

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001033285.1-1965s21c1
DNA Barcode:
CCGAGAGCAGAGCGAACATTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Cdc42bpa (226751)
Gene Description:
CDC42 binding protein kinase alpha
Transcript:
RefSeq NM_001033285.1 (CURRENT)
Match location:
Position 1965 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000360798)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCGAGAGCAGAGCGAACATTA
Hairpin Sequence:
5'-CCGG-CCGAGAGCAGAGCGAACATTA-CTCGAG-TAATGTTCGCTCTGCTCTCGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCGAGAGCAGAGCGAACATTACTCGAGTAATGTTCGCTCTGCTCTCGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCGAGAGCAGAGCGAACATTACTCGAGTAATGTTCGCTCTGCTCTCGG-3'

Other clones with same target sequence:

(none)