Construct: shRNA TRCN0000360838

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001033209.2-366s21c1
DNA Barcode:
CTATGAGGACAGCGTGCATTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Xylb (102448)
Gene Description:
xylulokinase homolog (H. influenzae)
Transcript:
RefSeq NM_001033209.2 (NON-CURRENT)
Match location:
Position 366 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000360838)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CTATGAGGACAGCGTGCATTT
Hairpin Sequence:
5'-CCGG-CTATGAGGACAGCGTGCATTT-CTCGAG-AAATGCACGCTGTCCTCATAG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCTATGAGGACAGCGTGCATTTCTCGAGAAATGCACGCTGTCCTCATAGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACTATGAGGACAGCGTGCATTTCTCGAGAAATGCACGCTGTCCTCATAG-3'

Other clones with same target sequence:

(none)