Construct: shRNA TRCN0000361995

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_145419.1-2010s21c1
DNA Barcode:
TCAAGAGGAGAAACGAGTTTG

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Hkdc1 (216019)
Gene Description:
hexokinase domain containing 1
Transcript:
RefSeq NM_145419.1 (CURRENT)
Match location:
Position 2010 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000361995)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TCAAGAGGAGAAACGAGTTTG
Hairpin Sequence:
5'-CCGG-TCAAGAGGAGAAACGAGTTTG-CTCGAG-CAAACTCGTTTCTCCTCTTGA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTCAAGAGGAGAAACGAGTTTGCTCGAGCAAACTCGTTTCTCCTCTTGATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATCAAGAGGAGAAACGAGTTTGCTCGAGCAAACTCGTTTCTCCTCTTGA-3'

Other clones with same target sequence:

  1. TRCN0000379520