Construct: shRNA TRCN0000374883

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_023844.4-820s21c1
DNA Barcode:
GGAGCTACGATGCCAGGATAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Jam2 (67374)
Gene Description:
junction adhesion molecule 2
Transcript:
RefSeq NM_023844.4 (NON-CURRENT)
Match location:
Position 820 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000374883)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GGAGCTACGATGCCAGGATAA
Hairpin Sequence:
5'-CCGG-GGAGCTACGATGCCAGGATAA-CTCGAG-TTATCCTGGCATCGTAGCTCC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGGAGCTACGATGCCAGGATAACTCGAGTTATCCTGGCATCGTAGCTCCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGGAGCTACGATGCCAGGATAACTCGAGTTATCCTGGCATCGTAGCTCC-3'

Other clones with same target sequence:

(none)