Construct: shRNA TRCN0000378182

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_003992.4-939s21c1
DNA Barcode:
AGTTTGAAACCCTCTACAATG

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CLK3 (1198)
Gene Description:
CDC like kinase 3
Transcript:
RefSeq NM_003992.4 (CURRENT)
Match location:
Position 939 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000378182)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGTTTGAAACCCTCTACAATG
Hairpin Sequence:
5'-CCGG-AGTTTGAAACCCTCTACAATG-CTCGAG-CATTGTAGAGGGTTTCAAACT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGTTTGAAACCCTCTACAATGCTCGAGCATTGTAGAGGGTTTCAAACTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGTTTGAAACCCTCTACAATGCTCGAGCATTGTAGAGGGTTTCAAACT-3'

Other clones with same target sequence:

(none)