Construct: shRNA TRCN0000378243

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001526.3-1547s21c1
DNA Barcode:
TCAGCAACTTTGATAACATAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
HCRTR2 (3062)
Gene Description:
hypocretin receptor 2
Transcript:
RefSeq NM_001526.3 (NON-CURRENT)
Match location:
Position 1547 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000378243)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TCAGCAACTTTGATAACATAT
Hairpin Sequence:
5'-CCGG-TCAGCAACTTTGATAACATAT-CTCGAG-ATATGTTATCAAAGTTGCTGA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTCAGCAACTTTGATAACATATCTCGAGATATGTTATCAAAGTTGCTGATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATCAGCAACTTTGATAACATATCTCGAGATATGTTATCAAAGTTGCTGA-3'

Other clones with same target sequence:

(none)