Construct: shRNA TRCN0000380450

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_004371.3-2514s21c1
DNA Barcode:
ATCTTATCACTGGCAACTTAG

Original Target:

Taxon:
Homo sapiens (human)
Gene:
COPA (1314)
Gene Description:
COPI coat complex subunit alpha
Transcript:
RefSeq NM_004371.3 (NON-CURRENT)
Match location:
Position 2514 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000380450)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
ATCTTATCACTGGCAACTTAG
Hairpin Sequence:
5'-CCGG-ATCTTATCACTGGCAACTTAG-CTCGAG-CTAAGTTGCCAGTGATAAGAT-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGATCTTATCACTGGCAACTTAGCTCGAGCTAAGTTGCCAGTGATAAGATTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAATCTTATCACTGGCAACTTAGCTCGAGCTAAGTTGCCAGTGATAAGAT-3'

Other clones with same target sequence:

(none)