Construct: shRNA TRCN0000380868

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_009306.2-1588s21c1
DNA Barcode:
CCATGCATTCCTGATACAATC

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Syt1 (20979)
Gene Description:
synaptotagmin I
Transcript:
RefSeq NM_009306.2 (NON-CURRENT)
Match location:
Position 1588 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000380868)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCATGCATTCCTGATACAATC
Hairpin Sequence:
5'-CCGG-CCATGCATTCCTGATACAATC-CTCGAG-GATTGTATCAGGAATGCATGG-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCATGCATTCCTGATACAATCCTCGAGGATTGTATCAGGAATGCATGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCATGCATTCCTGATACAATCCTCGAGGATTGTATCAGGAATGCATGG-3'

Other clones with same target sequence:

(none)