Construct: shRNA TRCN0000414139

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_012421.3-6011s21c1
DNA Barcode:
ACACTTGTTTGGTGCTAATTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
RLF (6018)
Gene Description:
rearranged L-myc fusion
Transcript:
RefSeq NM_012421.3 (NON-CURRENT)
Match location:
Position 6011 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000414139)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
ACACTTGTTTGGTGCTAATTA
Hairpin Sequence:
5'-CCGG-ACACTTGTTTGGTGCTAATTA-CTCGAG-TAATTAGCACCAAACAAGTGT-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGACACTTGTTTGGTGCTAATTACTCGAGTAATTAGCACCAAACAAGTGTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAACACTTGTTTGGTGCTAATTACTCGAGTAATTAGCACCAAACAAGTGT-3'

Other clones with same target sequence:

(none)