Construct: shRNA TRCN0000414606

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_030219.2-2148s21c1
DNA Barcode:
GGTTAGAGCCATCAATGATAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Trim42 (78911)
Gene Description:
tripartite motif-containing 42
Transcript:
RefSeq NM_030219.2 (CURRENT)
Match location:
Position 2148 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000414606)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GGTTAGAGCCATCAATGATAA
Hairpin Sequence:
5'-CCGG-GGTTAGAGCCATCAATGATAA-CTCGAG-TTATCATTGATGGCTCTAACC-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGGTTAGAGCCATCAATGATAACTCGAGTTATCATTGATGGCTCTAACCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGGTTAGAGCCATCAATGATAACTCGAGTTATCATTGATGGCTCTAACC-3'

Other clones with same target sequence:

(none)