Construct: shRNA TRCN0000415063
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_172920.4-893s21c1
- DNA Barcode:
- ATGTTGCTTGTGACCCATATT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Dpy19l1 (244745)
- Gene Description:
- dpy-19-like 1 (C. elegans)
- Transcript:
- RefSeq NM_172920.4 (CURRENT)
- Match location:
- Position 893 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000415063)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- ATGTTGCTTGTGACCCATATT
- Hairpin Sequence:
-
5'-CCGG-ATGTTGCTTGTGACCCATATT-CTCGAG-AATATGGGTCACAAGCAACAT-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGATGTTGCTTGTGACCCATATTCTCGAGAATATGGGTCACAAGCAACATTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAATGTTGCTTGTGACCCATATTCTCGAGAATATGGGTCACAAGCAACAT-3'
Other clones with same target sequence:
(none)
