Construct: shRNA TRCN0000416256
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_173540.2-1549s21c1
- DNA Barcode:
- GCGGAGCTAAGGAGATCTTAT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- FUT11 (170384)
- Gene Description:
- fucosyltransferase 11
- Transcript:
- RefSeq NM_173540.2 (NON-CURRENT)
- Match location:
- Position 1549 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000416256)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCGGAGCTAAGGAGATCTTAT
- Hairpin Sequence:
-
5'-CCGG-GCGGAGCTAAGGAGATCTTAT-CTCGAG-ATAAGATCTCCTTAGCTCCGC-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCGGAGCTAAGGAGATCTTATCTCGAGATAAGATCTCCTTAGCTCCGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCGGAGCTAAGGAGATCTTATCTCGAGATAAGATCTCCTTAGCTCCGC-3'
Other clones with same target sequence:
(none)
