Construct: shRNA TRCN0000418232

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_172553.4-1118s21c1
DNA Barcode:
AGGAGCACACCGCCAATATTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Alx1 (216285)
Gene Description:
ALX homeobox 1
Transcript:
RefSeq NM_172553.4 (CURRENT)
Match location:
Position 1118 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000418232)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGGAGCACACCGCCAATATTT
Hairpin Sequence:
5'-CCGG-AGGAGCACACCGCCAATATTT-CTCGAG-AAATATTGGCGGTGTGCTCCT-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGGAGCACACCGCCAATATTTCTCGAGAAATATTGGCGGTGTGCTCCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGGAGCACACCGCCAATATTTCTCGAGAAATATTGGCGGTGTGCTCCT-3'

Other clones with same target sequence:

(none)