Construct: shRNA TRCN0000418237

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_004934.3-2921s21c1
DNA Barcode:
GCAACCTTGTGGAATTTGCTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CDH18 (1016)
Gene Description:
cadherin 18
Transcript:
RefSeq NM_004934.3 (NON-CURRENT)
Match location:
Position 2921 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000418237)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAACCTTGTGGAATTTGCTT
Hairpin Sequence:
5'-CCGG-GCAACCTTGTGGAATTTGCTT-CTCGAG-AAGCAAATTCCACAAGGTTGC-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAACCTTGTGGAATTTGCTTCTCGAGAAGCAAATTCCACAAGGTTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAACCTTGTGGAATTTGCTTCTCGAGAAGCAAATTCCACAAGGTTGC-3'

Other clones with same target sequence:

(none)