Construct: shRNA TRCN0000418498

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_030767.4-1079s21c1
DNA Barcode:
CACTCCCTTCCCGATTCATTG

Original Target:

Taxon:
Homo sapiens (human)
Gene:
AKNA (80709)
Gene Description:
AT-hook transcription factor
Transcript:
RefSeq NM_030767.4 (NON-CURRENT)
Match location:
Position 1079 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000418498)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CACTCCCTTCCCGATTCATTG
Hairpin Sequence:
5'-CCGG-CACTCCCTTCCCGATTCATTG-CTCGAG-CAATGAATCGGGAAGGGAGTG-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCACTCCCTTCCCGATTCATTGCTCGAGCAATGAATCGGGAAGGGAGTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACACTCCCTTCCCGATTCATTGCTCGAGCAATGAATCGGGAAGGGAGTG-3'

Other clones with same target sequence:

(none)