Construct: shRNA TRCN0000424886
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_183175.3-89s21c1
- DNA Barcode:
- TGCATGCACGAGAAGTGTATT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- C1qtnf9 (239126)
- Gene Description:
- C1q and tumor necrosis factor related protein 9
- Transcript:
- RefSeq NM_183175.3 (NON-CURRENT)
- Match location:
- Position 89 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000424886)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- TGCATGCACGAGAAGTGTATT
- Hairpin Sequence:
-
5'-CCGG-TGCATGCACGAGAAGTGTATT-CTCGAG-AATACACTTCTCGTGCATGCA-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGTGCATGCACGAGAAGTGTATTCTCGAGAATACACTTCTCGTGCATGCATTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAATGCATGCACGAGAAGTGTATTCTCGAGAATACACTTCTCGTGCATGCA-3'
Other clones with same target sequence:
(none)
