Construct: shRNA TRCN0000425242

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_010714.3-1490s21c1
DNA Barcode:
GTATCAGTCCTATCTGTTAAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Lhx9 (16876)
Gene Description:
LIM homeobox protein 9
Transcript:
RefSeq NM_010714.3 (CURRENT)
Match location:
Position 1490 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000425242)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GTATCAGTCCTATCTGTTAAT
Hairpin Sequence:
5'-CCGG-GTATCAGTCCTATCTGTTAAT-CTCGAG-ATTAACAGATAGGACTGATAC-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGTATCAGTCCTATCTGTTAATCTCGAGATTAACAGATAGGACTGATACTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGTATCAGTCCTATCTGTTAATCTCGAGATTAACAGATAGGACTGATAC-3'

Other clones with same target sequence:

(none)