Construct: shRNA TRCN0000426417
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_010919.2-1513s21c1
- DNA Barcode:
- ACCAAACCATCCCAACGTTAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Nkx2-2 (18088)
- Gene Description:
- NK2 homeobox 2
- Transcript:
- RefSeq NM_010919.2 (CURRENT)
- Match location:
- Position 1513 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000426417)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- ACCAAACCATCCCAACGTTAA
- Hairpin Sequence:
-
5'-CCGG-ACCAAACCATCCCAACGTTAA-CTCGAG-TTAACGTTGGGATGGTTTGGT-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGACCAAACCATCCCAACGTTAACTCGAGTTAACGTTGGGATGGTTTGGTTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAACCAAACCATCCCAACGTTAACTCGAGTTAACGTTGGGATGGTTTGGT-3'
Other clones with same target sequence:
(none)
