Construct: shRNA TRCN0000426480

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_173462.3-2987s21c1
DNA Barcode:
AGATCCAACTTCGCATCATAG

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PAPLN (89932)
Gene Description:
papilin, proteoglycan like sulfated glycoprotein
Transcript:
RefSeq NM_173462.3 (NON-CURRENT)
Match location:
Position 2987 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000426480)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGATCCAACTTCGCATCATAG
Hairpin Sequence:
5'-CCGG-AGATCCAACTTCGCATCATAG-CTCGAG-CTATGATGCGAAGTTGGATCT-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGATCCAACTTCGCATCATAGCTCGAGCTATGATGCGAAGTTGGATCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGATCCAACTTCGCATCATAGCTCGAGCTATGATGCGAAGTTGGATCT-3'

Other clones with same target sequence:

(none)