Construct: shRNA TRCN0000429354

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_004449.4-331s21c1
DNA Barcode:
GTGAGGACCAGTCGTTGTTTG

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ERG (2078)
Gene Description:
ETS transcription factor ERG
Transcript:
RefSeq NM_004449.4 (CURRENT)
Match location:
Position 331 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000429354)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GTGAGGACCAGTCGTTGTTTG
Hairpin Sequence:
5'-CCGG-GTGAGGACCAGTCGTTGTTTG-CTCGAG-CAAACAACGACTGGTCCTCAC-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGTGAGGACCAGTCGTTGTTTGCTCGAGCAAACAACGACTGGTCCTCACTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGTGAGGACCAGTCGTTGTTTGCTCGAGCAAACAACGACTGGTCCTCAC-3'

Other clones with same target sequence:

(none)