Construct: shRNA TRCN0000431058

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001080530.2-830s21c1
DNA Barcode:
AGACCAGAGTTTGTCGGATTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SNX29 (92017)
Gene Description:
sorting nexin 29
Transcript:
RefSeq NM_001080530.2 (NON-CURRENT)
Match location:
Position 830 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000431058)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGACCAGAGTTTGTCGGATTT
Hairpin Sequence:
5'-CCGG-AGACCAGAGTTTGTCGGATTT-CTCGAG-AAATCCGACAAACTCTGGTCT-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGACCAGAGTTTGTCGGATTTCTCGAGAAATCCGACAAACTCTGGTCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGACCAGAGTTTGTCGGATTTCTCGAGAAATCCGACAAACTCTGGTCT-3'

Other clones with same target sequence:

(none)