Construct: shRNA TRCN0000431397

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_000079.3-1172s21c1
DNA Barcode:
ACATTGATATCTCTGACATTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CHRNA1 (1134)
Gene Description:
cholinergic receptor nicotinic alpha 1 subunit
Transcript:
RefSeq NM_000079.3 (NON-CURRENT)
Match location:
Position 1172 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000431397)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
ACATTGATATCTCTGACATTT
Hairpin Sequence:
5'-CCGG-ACATTGATATCTCTGACATTT-CTCGAG-AAATGTCAGAGATATCAATGT-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGACATTGATATCTCTGACATTTCTCGAGAAATGTCAGAGATATCAATGTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAACATTGATATCTCTGACATTTCTCGAGAAATGTCAGAGATATCAATGT-3'

Other clones with same target sequence:

(none)