Construct: shRNA TRCN0000431954

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_026492.3-670s21c1
DNA Barcode:
AGAGGAAGAAGATGATGATTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Ssxb1 (67985)
Gene Description:
synovial sarcoma, X member B1
Transcript:
RefSeq NM_026492.3 (CURRENT)
Match location:
Position 670 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000431954)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGAGGAAGAAGATGATGATTA
Hairpin Sequence:
5'-CCGG-AGAGGAAGAAGATGATGATTA-CTCGAG-TAATCATCATCTTCTTCCTCT-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGAGGAAGAAGATGATGATTACTCGAGTAATCATCATCTTCTTCCTCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGAGGAAGAAGATGATGATTACTCGAGTAATCATCATCTTCTTCCTCT-3'

Other clones with same target sequence:

(none)