Construct: shRNA TRCN0000432483
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_005708.3-2007s21c1
- DNA Barcode:
- TTCATCAGACAGCAGATTATG
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- GPC6 (10082)
- Gene Description:
- glypican 6
- Transcript:
- RefSeq NM_005708.3 (NON-CURRENT)
- Match location:
- Position 2007 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000432483)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- TTCATCAGACAGCAGATTATG
- Hairpin Sequence:
-
5'-CCGG-TTCATCAGACAGCAGATTATG-CTCGAG-CATAATCTGCTGTCTGATGAA-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGTTCATCAGACAGCAGATTATGCTCGAGCATAATCTGCTGTCTGATGAATTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAATTCATCAGACAGCAGATTATGCTCGAGCATAATCTGCTGTCTGATGAA-3'
Other clones with same target sequence:
(none)
