Construct: shRNA TRCN0000432972
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_153456.2-1587s21c1
- DNA Barcode:
- TTTATCCAGCTGGAGATTATC
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- HS6ST3 (266722)
- Gene Description:
- heparan sulfate 6-O-sulfotransferase 3
- Transcript:
- RefSeq NM_153456.2 (NON-CURRENT)
- Match location:
- Position 1587 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000432972)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- TTTATCCAGCTGGAGATTATC
- Hairpin Sequence:
-
5'-CCGG-TTTATCCAGCTGGAGATTATC-CTCGAG-GATAATCTCCAGCTGGATAAA-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGTTTATCCAGCTGGAGATTATCCTCGAGGATAATCTCCAGCTGGATAAATTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAATTTATCCAGCTGGAGATTATCCTCGAGGATAATCTCCAGCTGGATAAA-3'
Other clones with same target sequence:
(none)
