Construct: shRNA TRCN0000434117

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_000285.3-633s21c1
DNA Barcode:
GCAAGTTCGAAGTCAACAATA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PEPD (5184)
Gene Description:
peptidase D
Transcript:
RefSeq NM_000285.3 (NON-CURRENT)
Match location:
Position 633 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000434117)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAAGTTCGAAGTCAACAATA
Hairpin Sequence:
5'-CCGG-GCAAGTTCGAAGTCAACAATA-CTCGAG-TATTGTTGACTTCGAACTTGC-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAAGTTCGAAGTCAACAATACTCGAGTATTGTTGACTTCGAACTTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAAGTTCGAAGTCAACAATACTCGAGTATTGTTGACTTCGAACTTGC-3'

Other clones with same target sequence:

(none)