Construct: shRNA TRCN0000435179

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_011549.3-533s21c1
DNA Barcode:
AGACCTATGGGAACAAGTTTG

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Tfeb (21425)
Gene Description:
transcription factor EB
Transcript:
RefSeq NM_011549.3 (CURRENT)
Match location:
Position 533 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000435179)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGACCTATGGGAACAAGTTTG
Hairpin Sequence:
5'-CCGG-AGACCTATGGGAACAAGTTTG-CTCGAG-CAAACTTGTTCCCATAGGTCT-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGACCTATGGGAACAAGTTTGCTCGAGCAAACTTGTTCCCATAGGTCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGACCTATGGGAACAAGTTTGCTCGAGCAAACTTGTTCCCATAGGTCT-3'

Other clones with same target sequence:

(none)