Construct: shRNA TRCN0000435201
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_025883.3-1813s21c1
- DNA Barcode:
- CAGAAATGTTTATTACCGTTT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Zdhhc6 (66980)
- Gene Description:
- zinc finger, DHHC domain containing 6
- Transcript:
- RefSeq NM_025883.3 (CURRENT)
- Match location:
- Position 1813 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000435201)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CAGAAATGTTTATTACCGTTT
- Hairpin Sequence:
-
5'-CCGG-CAGAAATGTTTATTACCGTTT-CTCGAG-AAACGGTAATAAACATTTCTG-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCAGAAATGTTTATTACCGTTTCTCGAGAAACGGTAATAAACATTTCTGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACAGAAATGTTTATTACCGTTTCTCGAGAAACGGTAATAAACATTTCTG-3'
Other clones with same target sequence:
(none)
