Construct: shRNA TRCN0000437137

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001004439.1-3851s21c1
DNA Barcode:
GGAGACTGGGACACCTTTAAC

Original Target:

Taxon:
Homo sapiens (human)
Gene:
ITGA11 (22801)
Gene Description:
integrin subunit alpha 11
Transcript:
RefSeq NM_001004439.1 (NON-CURRENT)
Match location:
Position 3851 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000437137)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GGAGACTGGGACACCTTTAAC
Hairpin Sequence:
5'-CCGG-GGAGACTGGGACACCTTTAAC-CTCGAG-GTTAAAGGTGTCCCAGTCTCC-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGGAGACTGGGACACCTTTAACCTCGAGGTTAAAGGTGTCCCAGTCTCCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGGAGACTGGGACACCTTTAACCTCGAGGTTAAAGGTGTCCCAGTCTCC-3'

Other clones with same target sequence:

(none)