Construct: shRNA TRCN0000438068

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_016148.2-6469s21c1
DNA Barcode:
CATCGACCGGGCTCTCAAATT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
SHANK1 (50944)
Gene Description:
SH3 and multiple ankyrin repeat domains 1
Transcript:
RefSeq NM_016148.2 (NON-CURRENT)
Match location:
Position 6469 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000438068)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CATCGACCGGGCTCTCAAATT
Hairpin Sequence:
5'-CCGG-CATCGACCGGGCTCTCAAATT-CTCGAG-AATTTGAGAGCCCGGTCGATG-TTTTTTGAAT-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCATCGACCGGGCTCTCAAATTCTCGAGAATTTGAGAGCCCGGTCGATGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACATCGACCGGGCTCTCAAATTCTCGAGAATTTGAGAGCCCGGTCGATG-3'

Other clones with same target sequence:

(none)