Construct: shRNA TRCN0000447809
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_153406.3-3788s21c1
- DNA Barcode:
- TGGAGTGCAAACAGCATAAAG
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Specc1l (74392)
- Gene Description:
- sperm antigen with calponin homology and coiled-coil domains 1-like
- Transcript:
- RefSeq NM_153406.3 (CURRENT)
- Match location:
- Position 3788 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000447809)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- TGGAGTGCAAACAGCATAAAG
- Hairpin Sequence:
-
5'-CCGG-TGGAGTGCAAACAGCATAAAG-CTCGAG-CTTTATGCTGTTTGCACTCCA-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGTGGAGTGCAAACAGCATAAAGCTCGAGCTTTATGCTGTTTGCACTCCATTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAATGGAGTGCAAACAGCATAAAGCTCGAGCTTTATGCTGTTTGCACTCCA-3'
Other clones with same target sequence:
(none)
