Construct: shRNA TRCN0000450738
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_145292.3-1096s21c1
- DNA Barcode:
- TTTGATTGGAACCTACAATTT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- GALNTL5 (168391)
- Gene Description:
- polypeptide N-acetylgalactosaminyltransferase like 5
- Transcript:
- RefSeq NM_145292.3 (NON-CURRENT)
- Match location:
- Position 1096 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000450738)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- TTTGATTGGAACCTACAATTT
- Hairpin Sequence:
-
5'-CCGG-TTTGATTGGAACCTACAATTT-CTCGAG-AAATTGTAGGTTCCAATCAAA-TTTTTTGAAT-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGTTTGATTGGAACCTACAATTTCTCGAGAAATTGTAGGTTCCAATCAAATTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAATTTGATTGGAACCTACAATTTCTCGAGAAATTGTAGGTTCCAATCAAA-3'
Other clones with same target sequence:
(none)
