Construct: ORF ccsbBroad304_00019

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002807.1_s304c1, BRDN0000407661
Derived from:
ccsbBroadEn_00019
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ACVRL1 (94)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_00019
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 94 ACVRL1 activin A receptor like type 1 NM_000020.3 100% 100%
2 human 94 ACVRL1 activin A receptor like type 1 NM_001077401.2 100% 100%
3 human 94 ACVRL1 activin A receptor like type 1 XM_005269235.2 100% 100%
4 human 94 ACVRL1 activin A receptor like type 1 XM_011539008.1 77.1% 77.1% 1_42del;353_354ins312
5 human 94 ACVRL1 activin A receptor like type 1 XM_024449279.1 47.7% 47.7% 0_1ins789
6 mouse 11482 Acvrl1 activin A receptor, type II... NM_001277257.1 85% 88.4% (many diffs)
7 mouse 11482 Acvrl1 activin A receptor, type II... NM_001277258.1 85% 88.4% (many diffs)
8 mouse 11482 Acvrl1 activin A receptor, type II... NM_001277259.1 85% 88.4% (many diffs)
9 mouse 11482 Acvrl1 activin A receptor, type II... NM_009612.3 85% 88.4% (many diffs)
10 mouse 11482 Acvrl1 activin A receptor, type II... NM_001277255.1 82.5% 85.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1575
ORF length:
1509
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgac cttgggctcc cccaggaaag gccttctgat gctgctgatg gccttggtga
121cccagggaga ccctgtgaag ccgtctcggg gcccgctggt gacctgcacg tgtgagagcc
181cacattgcaa ggggcctacc tgccgggggg cctggtgcac agtagtgctg gtgcgggagg
241aggggaggca cccccaggaa catcggggct gcgggaactt gcacagggag ctctgcaggg
301ggcgccccac cgagttcgtc aaccactact gctgcgacag ccacctctgc aaccacaacg
361tgtccctggt gctggaggcc acccaacctc cttcggagca gccgggaaca gatggccagc
421tggccctgat cctgggcccc gtgctggcct tgctggccct ggtggccctg ggtgtcctgg
481gcctgtggca tgtccgacgg aggcaggaga agcagcgtgg cctgcacagc gagctgggag
541agtccagtct catcctgaaa gcatctgagc agggcgacag catgttgggg gacctcctgg
601acagtgactg caccacaggg agtggctcag ggctcccctt cctggtgcag aggacagtgg
661cacggcaggt tgccttggtg gagtgtgtgg gaaaaggccg ctatggcgaa gtgtggcggg
721gcttgtggca cggtgagagt gtggccgtca agatcttctc ctcgagggat gaacagtcct
781ggttccggga gactgagatc tataacacag tgttgctcag acacgacaac atcctaggct
841tcatcgcctc agacatgacc tcccgcaact cgagcacgca gctgtggctc atcacgcact
901accacgagca cggctccctc tacgactttc tgcagagaca gacgctggag ccccatctgg
961ctctgaggct agctgtgtcc gcggcatgcg gcctggcgca cctgcacgtg gagatcttcg
1021gtacacaggg caaaccagcc attgcccacc gcgacttcaa gagccgcaat gtgctggtca
1081agagcaacct gcagtgttgc atcgccgacc tgggcctggc tgtgatgcac tcacagggca
1141gcgattacct ggacatcggc aacaacccga gagtgggcac caagcggtac atggcacccg
1201aggtgctgga cgagcagatc cgcacggact gctttgagtc ctacaagtgg actgacatct
1261gggcctttgg cctggtgctg tgggagattg cccgccggac catcgtgaat ggcatcgtgg
1321aggactatag accacccttc tatgatgtgg tgcccaatga ccccagcttt gaggacatga
1381agaaggtggt gtgtgtggat cagcagaccc ccaccatccc taaccggctg gctgcagacc
1441cggtcctctc aggcctagct cagatgatgc gggagtgctg gtacccaaac ccctctgccc
1501gactcaccgc gctgcggatc aagaagacac tacaaaaaat tagcaacagt ccagagaagc
1561ctaaagtgat tcaataccca actttcttgt acaaagtggt tggtaagcct atccctaacc
1621ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt
1681cgacaatcaa cctctggatt a

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