Construct: ORF ccsbBroad304_01822

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013249.1_s304c1, BRDN0000403834
Derived from:
ccsbBroadEn_01822
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF227 (7770)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_01822
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7770 ZNF227 zinc finger protein 227 NM_001289166.1 99.9% 100% 720T>C;816T>C
2 human 7770 ZNF227 zinc finger protein 227 NM_182490.3 99.9% 100% 720T>C;816T>C
3 human 7770 ZNF227 zinc finger protein 227 XM_005259232.3 99.9% 100% 720T>C;816T>C
4 human 7770 ZNF227 zinc finger protein 227 XM_011527289.2 99.9% 100% 720T>C;816T>C
5 human 7770 ZNF227 zinc finger protein 227 XM_017027266.1 99.9% 100% 720T>C;816T>C
6 human 7770 ZNF227 zinc finger protein 227 XM_011527290.1 99% 99.1% 186_187ins21;699T>C;795T>C
7 human 7770 ZNF227 zinc finger protein 227 NM_001289173.1 96.4% 96.4% 187_188ins84;636T>C;732T>C
8 human 7770 ZNF227 zinc finger protein 227 XM_006723371.1 96.4% 96.4% 187_188ins84;636T>C;732T>C
9 human 7770 ZNF227 zinc finger protein 227 XM_017027267.1 96.4% 96.4% 187_188ins84;636T>C;732T>C
10 human 7770 ZNF227 zinc finger protein 227 NM_001289167.1 93.5% 93.6% 0_1ins153;567T>C;663T>C
11 human 7770 ZNF227 zinc finger protein 227 NM_001289168.1 93.5% 93.6% 0_1ins153;567T>C;663T>C
12 human 7770 ZNF227 zinc finger protein 227 NM_001289169.1 93.5% 93.6% 0_1ins153;567T>C;663T>C
13 human 7770 ZNF227 zinc finger protein 227 XM_017027268.1 93.5% 93.6% 0_1ins153;567T>C;663T>C
14 human 7770 ZNF227 zinc finger protein 227 XM_017027269.2 93.5% 93.6% 0_1ins153;567T>C;663T>C
15 human 7770 ZNF227 zinc finger protein 227 XM_017027270.1 93.5% 93.6% 0_1ins153;567T>C;663T>C
16 human 7770 ZNF227 zinc finger protein 227 XM_017027271.2 93.5% 93.6% 0_1ins153;567T>C;663T>C
17 human 7770 ZNF227 zinc finger protein 227 XM_017027272.1 92.6% 92.7% (many diffs)
18 human 7770 ZNF227 zinc finger protein 227 XM_017027273.2 92.6% 92.7% (many diffs)
19 human 7770 ZNF227 zinc finger protein 227 XM_017027274.2 92.6% 92.7% (many diffs)
20 human 7770 ZNF227 zinc finger protein 227 XM_017027275.1 91.1% 91.2% 0_1ins210;510T>C;606T>C
21 human 7770 ZNF227 zinc finger protein 227 XM_017027276.2 91.1% 91.2% 0_1ins210;510T>C;606T>C
22 human 7770 ZNF227 zinc finger protein 227 XM_017027277.1 91.1% 91.2% 0_1ins210;510T>C;606T>C
23 human 7770 ZNF227 zinc finger protein 227 XM_017027278.1 91.1% 91.2% 0_1ins210;510T>C;606T>C
24 human 7770 ZNF227 zinc finger protein 227 NM_001289170.1 90% 90.1% (many diffs)
25 human 7770 ZNF227 zinc finger protein 227 NM_001289171.1 90% 90.1% (many diffs)
26 human 7770 ZNF227 zinc finger protein 227 XM_017027279.1 90% 90.1% (many diffs)
27 human 7770 ZNF227 zinc finger protein 227 NM_001289172.1 87.7% 87.8% 0_1ins291;429T>C;525T>C
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2463
ORF length:
2397
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc atctcagaac tatgaccttc cccagaagaa gcaggagaaa atgaccaagt
121ttcaggaggc tgtgacattc aaggatgtgg ctgtggtctt ctccagggag gaactgcgac
181tgctcgatct tacccagagg aagctgtacc gagatgtcat ggtggagaac ttcaagaacc
241tggttgcagt ggggcatctt cccttccaac cagatatggt atcccaattg gaagcagaag
301aaaagctttg gatgatggaa acagaaaccc aaagaagcag caagcatcaa aataagatgg
361aaacactcca aaaatttgca ttaaaatacc tttcaaatca agagctgtcc tgctggcaaa
421tctggaaaca ggttgcaagt gaattaacca ggtgtcttca ggggaagagt tcccagttat
481tacaaggtga ctctattcag gtttctgaaa atgagaacaa tataatgaac cctaaaggag
541atagctctat ttatattgaa aatcaagagt ttccattttg gagaacccag cattcttgcg
601ggaatacata tctgagtgag tcacagattc agagtagagg taagcaaatt gatgtgaaaa
661ataacctgca aatacatgaa gacttcatga agaaatcacc atttcatgag catattaaaa
721ctgacacaga accaaaaccc tgcaaaggta atgaatatgg caaaatcatt agtgatggct
781ccaaccagaa attaccctta ggagagaaac cccatccatg tggtgagtgt ggaaggggct
841tcagttatag cccaaggctt ccccttcatc cgaatgttca cacaggagaa aaatgcttca
901gtcaaagctc acatctgcga actcatcaga gaattcaccc aggagagaaa ctcaatagat
961gtcatgaatc tggtgattgc ttcaataaga gctcttttca ttcttatcaa tctaatcata
1021caggagagaa gtcttataga tgcgacagtt gcggcaaggg attcagtagc agcacgggtc
1081ttatcattca ttacagaact catactggag agaaacccta taaatgcgag gaatgtggta
1141aatgctttag tcaaagttca aattttcagt gccatcagag agtccacact gaagaaaaac
1201catacaaatg cgaagagtgt ggtaagggct tcggttggag tgttaatctc cgtgttcacc
1261agagggtcca caggggtgag aagccctata aatgtgagga atgtggtaag ggcttcactc
1321aggctgcaca ttttcacatc catcagagag tccacactgg agagaaaccc tacaagtgtg
1381atgtgtgtgg taagggcttc agccacaatt caccattaat atgccatcgg agagtccaca
1441caggagagaa gccatacaag tgtgaggcgt gtgggaaagg ctttacccgt aatacagatc
1501tgcatattca tttcagagtt cacacgggag agaaacccta taaatgtaag gagtgtggta
1561agggcttcag tcaggcttca aatcttcaag tccatcagaa tgtccacact ggggagaaac
1621gattcaagtg tgaaacgtgt gggaagggct tcagtcagtc ctcaaagctt caaacccatc
1681agcgagtcca cactggagag aaaccatata gatgtgatgt gtgtggtaag gacttcagtt
1741atagttcaaa tcttaaacta caccaagtaa ttcacactgg agaaaaacca tataaatgtg
1801aggaatgtgg gaagggcttc agttggagat caaatcttca tgcacatcaa agagttcact
1861caggagaaaa accctataaa tgtgagcagt gtgataagag cttcagtcag gccatagatt
1921ttcgggtaca tcagagagtc catactggag agaagccata caaatgtggt gtctgtggta
1981agggcttcag tcagtcctct ggtcttcaat cccatcagag agtccacacg ggggaaaagc
2041catacaaatg tgatgtgtgt ggaaagggct ttagatacag ttcgcagttt atataccatc
2101agagaggcca cactggagaa aaaccttaca aatgtgaaga gtgtgggaaa ggctttggta
2161ggagcttgaa tcttcgccat catcagaggg tccacacggg agagaaaccc catatatgtg
2221aggagtgtgg taaggccttc agtctcccct caaatcttcg agtccacctg ggtgttcaca
2281ccagggaaaa actctttaaa tgtgaagagt gtggtaaagg cttcagtcag agtgcacgtc
2341ttgaagccca tcagagagtc cacactggag aaaaaccata caaatgtgac atatgtgata
2401aggacttccg tcaccgttca cgtcttacat atcatcagaa agtccatact ggtaaaaagc
2461tttacccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
2521tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
2581tctggatta

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