Construct: ORF ccsbBroad304_04021

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017061.1_s304c1, BRDN0000460486
Derived from:
ccsbBroadEn_04021
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DBNDD1 (79007)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04021
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79007 DBNDD1 dysbindin domain containing 1 NM_024043.3 100% 100%
2 human 79007 DBNDD1 dysbindin domain containing 1 NM_001288708.2 88% 83.7% (many diffs)
3 human 79007 DBNDD1 dysbindin domain containing 1 NM_001042610.3 86% 81.5% (many diffs)
4 human 79007 DBNDD1 dysbindin domain containing 1 NM_001288709.1 54.7% 52.9% (many diffs)
5 human 79007 DBNDD1 dysbindin domain containing 1 NM_001371581.1 42.6% 42.6% 0_1ins306
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
603
ORF length:
534
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gggagaaacc tggaagaata tttgctcaac tgtgaggcat ggttggtggc
121taagggatca cagaatggca ggcctgccta ttcctcctga gatcgttaag gaggctgagg
181tgccgcaggc tgcgctgggc gtcccagccc aggggacagg ggacaatggc cacacgcctg
241tggaggagga ggtcgggggc atcccagtac cagcaccggg gctcctgcag gtcacggaga
301ggaggcagcc tctgagcagc gtctcctctc tggaggtcca cttcgacctc ctggacctca
361ctgagctcac cgacatgtcg gaccaggagc tggccgaggt ctttgctgac tcggacgacg
421agaacctcaa caccgagtcc ccagcaggtc tgcacccgct gccccgggcc ggctacctgc
481gctccccttc ctggacgagg acaagggctg agcagagcca cgagaagcag cccctaggcg
541accccgagcg gcaggccaca gtcctggaca cgtttctcac tgtggagagg ccccaggagg
601acttgccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
661tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
721tctggatta

Download FASTA (ORF) (Full)