Construct: ORF ccsbBroad304_05262

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006068.1_s304c1, BRDN0000404763
Derived from:
ccsbBroadEn_05262
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
H2AC1 (221613)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05262
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 221613 H2AC1 H2A clustered histone 1 NM_170745.3 100% 100%
2 human 8334 H2AC6 H2A clustered histone 6 NM_003512.3 80.4% 93.8% (many diffs)
3 human 8329 H2AC13 H2A clustered histone 13 NM_003509.2 79.4% 93.1% (many diffs)
4 human 8331 H2AC14 H2A clustered histone 14 NM_021066.2 77.7% 90.8% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
459
ORF length:
393
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc tggacgaggg aagcagggag gaaaagcacg cgccaagtct aagtctcgct
121cttctagagc gggtttgcag tttcccgtag gccggatcca tcgtctgctt cgtaagggaa
181actatgcaga gcggataggg gcaggcgcac cagtgtattt ggcggcagtg ttagagtatc
241tcacagcaga aatccttgag ctggcaggca atgcgtctcg cgataacaaa aaaactcgca
301ttattccccg ccacctgcag ctagcgatcc gcaatgatga ggaactcaat aagcttttgg
361gcggcgtgac cattgcccag ggcggagtcc tgcctaacat tcaggcagtg ctgctgccca
421agaagactga gagtcaccac cataaagccc aaagcaagta cccaactttc ttgtacaaag
481tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta
541gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta

Download FASTA (ORF) (Full)