Construct: ORF ccsbBroad304_05838

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016972.1_s304c1, BRDN0000403362
Derived from:
ccsbBroadEn_05838
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
APOC2 (344)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05838
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 344 APOC2 apolipoprotein C2 NM_000483.5 99.6% 99% 106T>C
2 human 100533990 APOC4-APOC2 APOC4-APOC2 readthrough (NM... NR_037932.1 16.5% 1_1207del;1313T>C;1511_1829del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
369
ORF length:
303
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg cacacgactc ctcccagctc tgtttcttgt cctcctggta ttgggatttg
121aggtccaggg gacccaacag ccccagcaag atgagatgcc tagcccgacc ctcctcaccc
181aggtgaagga atctctctcc agttactggg agtcagcaaa gacagccgcc cagaacctgt
241acgagaagac atacctgccc gctgtagatg agaaactcag ggacttgtac agcaaaagca
301cagcagccat gagcacttac acaggcattt ttactgacca agttctttct gtgctgaagg
361gagaggagta cccaactttc ttgtacaaag tggttggtaa gcctatccct aaccctctcc
421tcggtctcga ttctacgtag taatgagcta gcgctaaccg gtggcgcgtt aagtcgacaa
481tcaacctctg gatta

Download FASTA (ORF) (Full)

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