Construct: ORF ccsbBroad304_06629

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001255.1_s304c1, BRDN0000408041
Derived from:
ccsbBroadEn_06629
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NEDD9 (4739)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06629
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4739 NEDD9 neural precursor cell expre... NM_182966.4 99.8% 100% 141A>G
2 human 4739 NEDD9 neural precursor cell expre... NM_006403.4 20.4% 18.8% (many diffs)
3 human 4739 NEDD9 neural precursor cell expre... NM_001142393.1 20.1% 18.4% (many diffs)
4 human 4739 NEDD9 neural precursor cell expre... NR_073131.1 9.8% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
588
ORF length:
522
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa gtataagaat cttatggcaa gggccttata tgacaatgtc ccagagtgtg
121ccgaggaact ggcctttcgc aagggagaca tcctgaccgt catagagcag aacacagggg
181gactggaagg atggtggctg tgctcgttac acggtcggca aggcattgtc ccaggcaacc
241gggtgaagct tctgattggt cccatgcagg agactgcctc cagtcacgag cagcctgcct
301ctggactgat gcagcagacc tttggccaac agaagctcta tcaagtgcca aacccacagg
361ctgctccccg agacaccatc taccaagtgc caccttccta ccaaaatcag ggaatttacc
421aagtccccac tggccacggc acccaagaac aagaggtata tcaggtgcca ccatcagtgc
481agagaagcat tgggggaacc agtgggcccc acgtgggtaa aaaggtgttc cagagagatg
541ggcaagtgtc ctatttctta gtgagagcct ctaaacaaac cagcttgtgc ccaactttct
601tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
661aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)