Construct: ORF ccsbBroad304_07302

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003736.1_s304c1, BRDN0000410213
Derived from:
ccsbBroadEn_07302
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FPGT (8790)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07302
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8790 FPGT fucose-1-phosphate guanylyl... NM_003838.4 97.8% 97.8% 1_39del;267G>A
2 human 8790 FPGT fucose-1-phosphate guanylyl... NM_001199328.2 55.9% 56% 1_39del;267G>A;447_448ins762
3 human 8790 FPGT fucose-1-phosphate guanylyl... NM_001199329.2 27.7% 19.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1848
ORF length:
1782
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc agctgctagg gaccctccgg aagtatcgct gcgagaagcc acccagcgaa
121aattgcggag gttttccgag ctaagaggca aacttgtagc acgtggagaa ttctgggaca
181tagttgcaat aacagcggct gatgaaaaac aggaacttgc ttacaaccaa cagctgtcag
241aaaagctgaa aagaaaggag ttaccccttg gagttcaata tcacgttttt gtagatcctg
301ctggagccaa aattggaaat ggaggatcaa cactttgtgc ccttcaatgt ttggaaaagc
361tatatggaga taaatggaat tcttttacca tcttattaat tcactctggt ggctacagtc
421aacgacttcc aaatgcaagt gctctgggaa aaattttcac tgctttacct cttggtaacc
481ccatttatca gatgctagaa ttaaaactag ccatgtacat tgatttcccc ttaaatatga
541atcctggaat tctggttacc tgtgcagatg atattgaact ttatagtatt ggagaatttg
601agtttattag gtttgacaaa cctggcttta ctgctttagc tcatccttct agtttgacga
661taggtaccac acatggagta tttgtcttag atccttttga tgatttaaaa catagagacc
721ttgaatacag gtcttgccat cgtttccttc ataagcccag catagaaaag atgtatcagt
781ttaatgctgt gtgtagacct ggaaattttt gtcaacagga ctttgctggg ggtgacattg
841ccgatcttaa attagactct gactatgtct acacagatag cctattttat atggatcata
901aatcagcaaa aatgttactt gctttttatg aaaaaatagg cacactgagc tgtgaaatag
961atgcctatgg tgactttctg caggctttgg gacctggagc aactgtggag tacaccagaa
1021acacatcaaa tgtcattaaa gaagagtcag agttggtaga aatgaggcag agaatatttc
1081atcttcttaa aggaacatca ctaaatgttg ttgttcttaa taactccaaa ttttatcaca
1141ttggaacaac cgaagaatat ttgttttact ttacctcaga taacagttta aagtcagagc
1201tcggcttaca gtccataact tttagtatct ttccagatat accagaatgc tctggcaaaa
1261catcctgtat cattcaaagc atactggatt caagatgttc tgtggcacct ggctcagttg
1321tggagtattc cagattgggg cctgatgttt cagttgggga aaactgcatt attagtggtt
1381cttacatcct aacaaaagct gccctccccg cacattcttt tgtatgttcc ttaagcttaa
1441agatgaatag atgcttaaag tatgcaacta tggcatttgg agtgcaagac aacttgaaaa
1501agagtgtgaa aacattgtca gatataaagt tacttcaatt ctttggagtc tgtttcctgt
1561catgcttaga tgtttggaat cttaaagtta cagaggaact gttctctggt aacaagacat
1621gtctgagttt gtggactgca cgcattttcc cagtttgttc ttctttgagt gactcagtta
1681taacatccct aaagatgtta aatgctgtta agaacaagtc agcattcagc ctgaatagct
1741ataagttgct gtccattgaa gaaatgctta tctacaaaga tgtagaagat atgataactt
1801acagggaaca aatttttcta gaaatcagtt taaaaagcag tttgatgtac ccgactttct
1861tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
1921aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)