Construct: ORF ccsbBroad304_09009

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007868.1_s304c1, BRDN0000406166
Derived from:
ccsbBroadEn_09009
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SPSB1 (80176)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_09009
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 80176 SPSB1 splA/ryanodine receptor dom... NM_025106.4 99.7% 99.2% 4G>T;14T>G
2 mouse 74646 Spsb1 splA/ryanodine receptor dom... NM_029035.2 88.4% 97.8% (many diffs)
3 mouse 74646 Spsb1 splA/ryanodine receptor dom... XM_006539234.2 88.4% 97.8% (many diffs)
4 mouse 74646 Spsb1 splA/ryanodine receptor dom... XM_011250344.2 88.4% 97.8% (many diffs)
5 mouse 74646 Spsb1 splA/ryanodine receptor dom... XM_011250345.2 88.4% 97.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
885
ORF length:
819
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtg tcagaagggc actggaggga tcaagactgt ggacatgagg gaccccacgt
121acaggcccct gaagcaggag ctccagggtc tggattactg caagcccacc cggctggatc
181tgctactgga catgccccct gtgtcctatg atgtccagct gctgcattca tggaacaaca
241acgaccgatc gctcaatgtc tttgtgaagg aggacgacaa gctcatcttt caccggcatc
301cggtggccca gagcacggac gctatcaggg gcaaagtcgg gtatacccgt gggctgcacg
361tgtggcagat cacgtgggcc atgagacagc ggggcacaca cgccgtggtg ggggtggcga
421cggcagacgc ccccctgcac tctgtcgggt acacaaccct cgtggggaat aaccacgagt
481cctggggctg ggacttgggg cgcaaccggc tctaccacga tggcaagaac cagccaagca
541aaacataccc agcctttctg gaaccagatg agacattcat tgtccctgac tccttcctgg
601tagccctgga catggacgac gggactctga gcttcattgt ggatggacag tacatgggag
661tggcttttcg gggactcaag ggcaaaaaac tgtatcctgt agtgagtgcc gtctggggcc
721actgtgagat ccgaatgcgc tacttgaacg gactcgatcc cgagccgctg ccgctcatgg
781atttgtgccg tcgctcggtg cgcctggccc tggggaggga gcgcctgggg gagatccaca
841cgctgccgct gccggcttcc ctcaaggcct acctcctcta ccagtgccca actttcttgt
901acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
961gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)